STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28900.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
AGA29870.1
Lysophospholipase L1-like esterase; PFAM: Domain of unknown function (DUF3472); GDSL-like Lipase/Acylhydrolase.
  
     0.686
AGA29392.1
Acetyl xylan esterase (AXE1)/PhoPQ-activated pathogenicity-related protein.
  
     0.656
AGA26758.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.629
AGA28899.1
DNA-binding domain-containing protein, AraC-type.
       0.628
AGA31000.1
Hypothetical protein.
  
     0.628
AGA30371.1
PFAM: Proteins of 100 residues with WXG.
  
     0.626
AGA28481.1
Lysophospholipase L1-like esterase.
  
     0.624
AGA25959.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.597
AGA24828.1
Dienelactone hydrolase-like enzyme; PFAM: Acetyl xylan esterase (AXE1).
  
     0.572
AGA30368.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family.
  
     0.554
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.