STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28933.1Putative glucan synthasis protein; PFAM: SMI1 / KNR4 family. (147 aa)    
Predicted Functional Partners:
AGA28932.1
VCBS repeat-containing protein; PFAM: Fibronectin type III domain; TIGRFAM: VCBS repeat.
  
   0.749
AGA25874.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
   
 
 0.732
AGA28803.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family.
   
 
 0.732
AGA30368.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family.
   
 
 0.732
AGA25615.1
PFAM: Glycosyl transferase family 2; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
 
   
 0.660
AGA26279.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.655
AGA30516.1
Phosphodiesterase/alkaline phosphatase D; PFAM: Calcineurin-like phosphoesterase.
  
     0.622
AGA25127.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
 
   
 0.551
AGA24739.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
 
   
 0.535
AGA29872.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: Domain of unknown function (DUF477).
  
     0.501
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.