STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28965.1PFAM: FG-GAP repeat. (892 aa)    
Predicted Functional Partners:
AGA26111.1
Hypothetical protein.
  
     0.734
AGA26115.1
Hypothetical protein.
  
     0.727
AGA31304.1
Hypothetical protein.
  
     0.724
AGA27571.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase.
  
     0.723
AGA29722.1
Hypothetical protein.
  
     0.723
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
  
     0.716
AGA29273.1
Hypothetical protein.
  
     0.714
AGA25824.1
Hypothetical protein.
  
     0.702
AGA25537.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
     0.701
AGA27843.1
Hypothetical protein.
  
    0.701
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.