STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28976.1PFAM: Bacterial protein of unknown function (DUF899). (259 aa)    
Predicted Functional Partners:
AGA28975.1
Hypothetical protein.
       0.805
AGA28977.1
Putative transcriptional regulator.
 
     0.651
AGA24677.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.538
AGA28978.1
PFAM: Activator of Hsp90 ATPase homolog 1-like protein.
       0.470
AGA28326.1
UTP:GlnB (protein PII) uridylyltransferase; PFAM: HD domain.
  
     0.455
AGA24497.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding; PFAM: Protein of unknown function (DUF1470); CGNR zinc finger.
  
     0.425
AGA25275.1
Hypothetical protein; PFAM: NIPSNAP.
 
     0.402
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.