STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29055.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
AGA27301.1
PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system.
  
    0.625
AGA27600.1
Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain.
   
  
 0.566
AGA30769.1
Hypothetical protein.
  
     0.531
AGA27739.1
Hypothetical protein.
  
     0.495
AGA29054.1
Phytoene dehydrogenase-like oxidoreductase; PFAM: FAD dependent oxidoreductase.
  
    0.494
AGA25170.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain.
  
    0.466
AGA25171.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; manually curated.
  
    0.456
AGA25173.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Stage II sporulation protein E (SpoIIE).
  
    0.450
AGA25395.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.450
AGA25069.1
Putative membrane protein.
  
    0.445
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.