STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29061.1PFAM: Protein kinase domain; GAF domain. (648 aa)    
Predicted Functional Partners:
AGA25791.1
PFAM: Protein phosphatase 2C.
  
   0.819
AGA27782.1
PFAM: Protein phosphatase 2C.
 
   0.819
AGA25428.1
Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
 
   0.818
AGA29060.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24; PFAM: ECF sigma factor.
   
   0.516
AGA26873.1
FHA domain-containing protein; PFAM: FHA domain.
  
 
   0.448
AGA24653.1
FHA domain-containing protein; PFAM: FHA domain.
  
 
   0.440
AGA29573.1
PFAM: Protein kinase domain; FHA domain.
  
 
  
0.430
AGA24978.1
PFAM: Protein kinase domain; FHA domain.
  
 
  
0.427
AGA27488.1
FHA domain-containing protein; PFAM: FHA domain.
  
 
   0.414
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.