STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29098.1Hypothetical protein. (1028 aa)    
Predicted Functional Partners:
AGA29097.1
Hypothetical protein; PFAM: ASPIC and UnbV.
 
   0.942
AGA29317.1
Hypothetical protein.
  
     0.764
AGA28142.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.740
AGA28261.1
Hypothetical protein.
  
     0.730
AGA26389.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.716
AGA31469.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.716
AGA24728.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.715
AGA25219.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.715
AGA26730.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.715
AGA28072.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.715
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.