STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29124.1PFAM: Doubled CXXCH motif (Paired_CXXCH_1). (483 aa)    
Predicted Functional Partners:
AGA29125.1
Hypothetical protein.
 
     0.938
AGA29122.1
Hypothetical protein.
 
     0.873
AGA29126.1
Hypothetical protein.
 
     0.872
AGA29127.1
Hypothetical protein.
 
     0.841
AGA25316.1
Hypothetical protein.
  
     0.774
AGA25317.1
Hypothetical protein; PFAM: LVIVD repeat.
  
     0.774
AGA25315.1
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; PFAM: Domain of unknown function (DUF336).
  
     0.773
AGA29123.1
PFAM: 4Fe-4S binding domain; Cyclic nucleotide-binding domain.
 
     0.758
AGA30174.1
Hypothetical protein.
  
 
   0.657
AGA30391.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.