STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29244.1TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase. (398 aa)    
Predicted Functional Partners:
AGA29453.1
6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.
 0.995
AGA31316.1
6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase.
 
 0.987
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.975
AGA29746.1
6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase.
 
 0.973
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.930
AGA25959.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
 
 0.778
AGA26758.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
 
 0.771
AGA28011.1
Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
  
    0.762
AGA30889.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
 
 0.752
AGA27722.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
 
 0.749
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.