STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29247.1Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor. (154 aa)    
Predicted Functional Partners:
AGA25173.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Stage II sporulation protein E (SpoIIE).
  
 
 0.969
AGA29430.1
PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; Hpt domain.
  
  
 0.832
AGA25174.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
  
 
 0.829
AGA27824.1
PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
  
   0.792
AGA27204.1
PFAM: Protein of unknown function (DUF1570).
  
     0.767
AGA24629.1
HEAT repeat-containing protein.
  
     0.765
AGA30668.1
PFAM: Glucuronate isomerase.
  
     0.762
AGA27493.1
Hypothetical protein.
  
     0.757
AGA29351.1
PFAM: PBS lyase HEAT-like repeat.
  
     0.756
AGA31552.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.756
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.