STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29269.1PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein. (154 aa)    
Predicted Functional Partners:
cysH
Thioredoxin-dependent phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.661
cysC
Adenylylsulfate kinase ApsK; Catalyzes the synthesis of activated sulfate.
     
 0.660
AGA27827.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.647
AGA24696.1
Cysteine desulfurase family protein; PFAM: Aminotransferase class-V.
  
  
 0.601
AGA25762.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
  
     0.576
AGA25617.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
  
  
 0.504
AGA30696.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
  
     0.428
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.