STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29273.1Hypothetical protein. (632 aa)    
Predicted Functional Partners:
AGA29274.1
Hypothetical protein.
 
     0.908
AGA25346.1
Hypothetical protein.
  
     0.774
AGA25537.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
     0.774
AGA25824.1
Hypothetical protein.
  
     0.774
AGA26108.1
Hypothetical protein.
  
     0.774
AGA26111.1
Hypothetical protein.
  
     0.774
AGA26115.1
Hypothetical protein.
  
     0.774
AGA26200.1
Hypothetical protein.
  
     0.774
AGA26624.1
Hypothetical protein.
  
     0.774
AGA26690.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.