STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29312.1Putative membrane protein; PFAM: GtrA-like protein; Glycosyl transferase family 2. (397 aa)    
Predicted Functional Partners:
AGA24488.1
PFAM: Glycosyl transferase family 2.
  
 
 0.910
AGA25850.1
PFAM: Glycosyl transferase family 2.
  
 
 0.910
AGA27945.1
PFAM: Glycosyl transferase family 2.
  
 
 0.910
AGA29311.1
Putative enzyme involved in biosynthesis of extracellular polysaccharides; PFAM: Antibiotic biosynthesis monooxygenase.
 
     0.544
AGA29223.1
Hypothetical protein.
 
    0.486
AGA27628.1
Hypothetical protein.
  
     0.485
AGA29862.1
Hypothetical protein.
  
     0.473
AGA31592.1
PFAM: Protein of unknown function (DUF820).
  
     0.463
AGA27627.1
Hypothetical protein.
  
     0.451
AGA27571.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase.
 
   
 0.434
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.