STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29340.1Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase. (304 aa)    
Predicted Functional Partners:
AGA27797.1
Peptidylarginine deiminase-like enzyme; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Belongs to the agmatine deiminase family.
 
 
 0.974
AGA24525.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
  
  
 
0.928
AGA27798.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
  
  
 
0.928
AGA28536.1
Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.
  
 0.913
AGA27009.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
  
     0.712
AGA26077.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase; manually curated; non-canonical start codon.
  
     0.648
AGA29339.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
       0.436
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.