STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29362.1PFAM: Ethanolamine ammonia lyase large subunit (EutB). (470 aa)    
Predicted Functional Partners:
AGA29360.1
Ethanolamine ammonia-lyase, small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC); Belongs to the EutC family.
 0.999
AGA24725.1
PFAM: Membrane domain of glycerophosphoryl diester phosphodiesterase; Glycerophosphoryl diester phosphodiesterase family.
     
  0.900
AGA28921.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
     
  0.900
AGA29526.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
     
  0.900
AGA29361.1
PFAM: Amino acid permease.
  
  
 0.808
AGA26140.1
PFAM: Aldehyde dehydrogenase family.
  
 
 0.558
AGA28927.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
     
  0.499
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.