STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29424.1Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (693 aa)    
Predicted Functional Partners:
AGA29878.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: DMSO reductase anchor subunit (DmsC).
 
 
 0.964
AGA27912.1
PFAM: Polysulphide reductase, NrfD.
  
 
 0.909
AGA29123.1
PFAM: 4Fe-4S binding domain; Cyclic nucleotide-binding domain.
 
 
 0.846
AGA27913.1
Fe-S-cluster-containing hydrogenase subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.791
AGA29972.1
Hypothetical protein.
  
  
 0.745
tuf
Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.704
AGA27909.1
Hypothetical protein.
   
 
 0.704
AGA29027.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
 
 0.587
AGA25629.1
PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; manually curated.
  
 
 0.586
AGA26194.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.582
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.