STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29456.1Flagellar motor switch/type III secretory pathway protein; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; flagellar motor switch protein FliN. (404 aa)    
Predicted Functional Partners:
AGA31457.1
Flagellar motor switch protein; PFAM: FliG C-terminal domain.
 
 0.998
AGA31455.1
Flagellar biosynthesis pathway, component FliP; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP.
 
  
 0.978
AGA31454.1
Flagellar biosynthesis pathway, component FliQ; PFAM: Bacterial export proteins, family 3.
 
  
 0.977
AGA31453.1
Flagellar biosynthesis pathway, component FliR; PFAM: Bacterial export proteins, family 1.
 
 
 0.970
AGA24755.1
Chemotaxis protein CheC, inhibitor of MCP methylation.
 
 
 0.968
AGA27935.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
 
 
 0.968
AGA31449.1
PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA.
 
  
 0.962
AGA31452.1
Flagellar biosynthesis pathway, component FlhB; PFAM: FlhB HrpN YscU SpaS Family.
 
  
 0.962
AGA31446.1
RNA polymerase sigma factor, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.944
AGA24757.1
PFAM: Response regulator receiver domain.
 
 
 0.940
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.