STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29488.1N-dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase. (284 aa)    
Predicted Functional Partners:
AGA29489.1
TIGR00300 family protein; PFAM: LOR/SDH bifunctional enzyme conserved region; TIGRFAM: TIGR00300 family protein.
     0.975
AGA29487.1
Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA.
       0.623
AGA25408.1
Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
   
    0.459
AGA25354.1
Calcium/proton exchanger Cax; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
   
    0.457
AGA29075.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
  
     0.436
AGA24550.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48; TIGRFAM: MJ0042 family finger-like domain.
  
     0.425
argD
PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.424
AGA30726.1
PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family.
  
     0.415
AGA28269.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
    0.414
AGA31269.1
PFAM: Protein of unknown function (DUF3386).
  
     0.413
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.