STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29532.1PFAM: Bacterial pre-peptidase C-terminal domain. (702 aa)    
Predicted Functional Partners:
AGA29534.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
 
     0.872
AGA27113.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.769
AGA27020.1
PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.768
AGA27359.1
PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.766
AGA30695.1
PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.763
AGA27471.1
PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.759
AGA26623.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.758
AGA30736.1
PFAM: Protein of unknown function (DUF1501).
  
     0.754
AGA25896.1
PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.752
AGA29813.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.752
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.