STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29610.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (368 aa)    
Predicted Functional Partners:
AGA25888.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.748
AGA29609.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase; TIGRFAM: probable O-glycosylation ligase, exosortase A-associated.
 
    0.718
AGA27378.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.710
AGA30679.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.698
AGA30008.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.663
AGA29605.1
PFAM: Protein of unknown function, DUF482; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated.
 
    0.644
AGA29611.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); exosortase A system-associated amidotransferase 1.
 
     0.643
AGA26574.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.624
AGA30005.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.615
AGA29606.1
PFAM: Glycosyl transferases group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated.
     0.591
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.