STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29635.1Putative oxidoreductase, aryl-alcohol dehydrogenase like protein; PFAM: Aldo/keto reductase family. (328 aa)    
Predicted Functional Partners:
AGA27368.1
PFAM: Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.458
AGA29966.1
PFAM: TAT (twin-arginine translocation) pathway signal sequence; Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.452
AGA29636.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
       0.451
AGA31109.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain.
  
 0.436
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.