STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29706.1Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain. (283 aa)    
Predicted Functional Partners:
AGA29707.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
 
  
0.819
AGA29704.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
 
     0.768
AGA29705.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.727
AGA29708.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
       0.640
AGA29709.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
       0.640
AGA29970.1
Hypothetical protein.
  
     0.439
AGA29703.1
Acyl carrier protein; PFAM: Phosphopantetheine attachment site.
       0.428
AGA27926.1
PFAM: Beta-galactosidase trimerisation domain.
  
     0.423
AGA31199.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.416
AGA29711.1
Putative peptidase; PFAM: Prenyltransferase and squalene oxidase repeat; Domain of Unknown Function (DUF1080).
       0.406
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.