STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA29767.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
AGA25140.1
PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA29107.1
YVTN family beta-propeller repeat protein; PFAM: Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA31468.1
YVTN family beta-propeller repeat protein; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA29768.1
Hypothetical protein.
       0.689
AGA29769.1
Hypothetical protein.
       0.689
AGA29770.1
Hypothetical protein.
       0.689
AGA29771.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: Peptidase C39 family.
       0.689
AGA25277.1
Large extracellular alpha-helical protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region.
  
  
 0.514
AGA30880.1
Hypothetical protein.
  
  
 0.499
AGA26566.1
Hypothetical protein.
   
 
 0.419
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.