STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM69800.1Integrase catalytic region; PFAM: Integrase core domain; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: lby:Lbys_0529 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Helix-turn-helix, Fis-type protein. (325 aa)    
Predicted Functional Partners:
AEM69801.1
Transposase IS3/IS911 family protein; PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein.
 
  
 0.951
AEM72029.1
Transposase IS3/IS911 family protein; PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein.
 
  
 0.815
AEM69799.1
Hypothetical protein.
       0.572
AEM69802.1
Integrase; KEGG: pdi:BDI_2138 integrase; SPTR: Tyrosine type site-specific recombinase.
     
 0.533
AEM69798.1
Hypothetical protein.
       0.520
AEM69796.1
KEGG: ote:Oter_2274 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.455
Your Current Organism:
Muricauda ruestringensis
NCBI taxonomy Id: 886377
Other names: M. ruestringensis DSM 13258, Muricauda ruestringensis B1, Muricauda ruestringensis DSM 13258, Muricauda ruestringensis str. DSM 13258, Muricauda ruestringensis strain DSM 13258
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.