STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGR_07971Luciferase-like monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (335 aa)    
Predicted Functional Partners:
HGR_07976
Hypothetical protein.
       0.773
HGR_15094
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.623
HGR_04573
FMN reductase; COG0431 Predicted flavoprotein.
 
 0.616
HGR_06991
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
  
 0.557
HGR_14719
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
  
 0.557
HGR_10962
Flavin reductase domain-containing protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.527
rutF
Pyrimidine utilization flavin reductase protein F; Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway; Belongs to the non-flavoprotein flavin reductase family. RutF subfamily.
  
 
 0.527
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.500
HGR_07966
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.480
HGR_15874
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
 
 0.434
Your Current Organism:
Hylemonella gracilis ATCC 19624
NCBI taxonomy Id: 887062
Other names: H. gracilis ATCC 19624, Hylemonella gracilis str. ATCC 19624, Hylemonella gracilis strain ATCC 19624
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.