STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KchTrkA N-terminal domain protein. (575 aa)    
Predicted Functional Partners:
EFV95888.1
Hypothetical protein.
 
     0.936
moaE
Molybdopterin converting factor, subunit 2; COG: COG0314.
   
    0.775
EFV95525.1
Hypothetical protein.
  
    0.710
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
   
    0.677
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.636
FadR
Transcriptional regulator, TetR family.
       0.631
thiD
Phosphomethylpyrimidine kinase; COG: COG0351.
  
    0.537
KefC_2
Transporter, CPA2 family; COG: COG0475; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.525
KefC_1
Transporter, CPA2 family; COG: COG0475; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.525
RsmB_2
Putative ribosomal RNA small subunit methyltransferase B; COG: COG0144; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
    0.510
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.