STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MacA_1Efflux transporter, RND family, MFP subunit. (416 aa)    
Predicted Functional Partners:
LolD_1
ABC transporter, ATP-binding protein; COG: COG1136.
 
   0.964
EFV95178.1
Efflux ABC transporter, permease protein.
 
     0.953
MacB_2
ABC transporter, ATP-binding protein; COG: COG1136; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.897
ApxIB
Type I secretion system ATPase; COG: COG2274.
  
 
 0.598
TolC
Type I secretion outer membrane protein, TolC family; COG: COG1538.
  
   0.507
OprM_2
Efflux transporter, outer membrane factor lipoprotein, NodT family; COG: COG1538.
  
   0.507
OprM_1
Efflux transporter, outer membrane factor lipoprotein, NodT family; COG: COG1538.
  
   0.507
BepC
Type I secretion outer membrane protein, TolC family.
  
   0.507
EFV95180.1
Oxidoreductase, FAD/FMN-binding protein; COG: COG1902.
       0.504
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.