STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZraSATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (593 aa)    
Predicted Functional Partners:
ZraR_2
Sigma-54 interaction domain protein; COG: COG2204.
 
 0.995
lpdA-2
Dihydrolipoyl dehydrogenase; COG: COG1249.
   
 0.935
rpoN
RNA polymerase sigma-54 factor; COG: COG1508.
     
 0.915
CheA
Hpt domain protein; COG: COG0643.
 
 
 0.851
PhoP_2
Response regulator receiver domain protein; COG: COG0784.
 
 
 0.848
PhoB
Response regulator receiver domain protein; COG: COG0784.
 
 
 0.844
AmpD
N-acetylmuramoyl-L-alanine amidase; COG: COG3023.
       0.800
EFV94554.1
Hypothetical protein.
       0.773
EFV94431.1
Type IV pilus assembly protein PilM; COG: COG4972.
  
   
 0.743
EFV95777.1
Type IV pilus assembly protein PilZ; COG: COG3215.
  
     0.742
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.