STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1038 aa)    
Predicted Functional Partners:
HsdM
Putative type I restriction-modification system, M subunit; COG: COG0286.
 
 
 0.996
EFV94001.1
Type I restriction modification DNA specificity domain protein; COG: COG0732.
 
  
 0.992
EFV93998.1
Divergent AAA domain protein; COG: COG2865.
  
    0.896
EFV94000.1
Hypothetical protein.
 
    0.723
EFV94006.1
Transcriptional regulator, MarR family; COG: COG4190.
   
    0.687
EFV94672.1
Divergent AAA domain protein.
  
    0.662
EFV93657.1
Opacity family porin protein; COG: COG3637.
   
    0.629
EFV93802.1
Hypothetical protein; COG: COG2865.
  
    0.588
EFV93956.1
Hypothetical protein.
   
    0.579
EFV96149.1
Divergent AAA domain protein; COG: COG2865.
  
    0.551
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.