STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV94191.1Hypothetical protein; COG: COG0811. (167 aa)    
Predicted Functional Partners:
EFV94190.1
Hypothetical protein.
 
  
 0.985
EFV94192.1
Hypothetical protein; COG: COG1429; 6.6.1.2.
 
    0.938
CobN
Putative cobaltochelatase subunit CobN; COG: COG1429.
 
  
 0.923
EFV93843.1
PepSY domain protein.
 
    0.631
CirA_1
TonB-dependent receptor; COG: COG4771.
 
    0.630
EFV93846.1
PepSY domain protein.
 
    0.612
ExbD_2
Putative protein TolR; COG: COG0848.
  
 
 0.592
EFV95000.1
Transport energizing protein, ExbD/TolR family.
  
 
 0.592
ExbD_1
Transport energizing protein, ExbD/TolR family; COG: COG0848.
  
 
 0.592
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.507
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.