STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FcuA_1TonB-dependent siderophore receptor. (739 aa)    
Predicted Functional Partners:
EFV94200.1
Tat pathway signal sequence domain protein; COG: COG0614.
 
     0.758
FhuE
TonB-dependent siderophore receptor.
  
     0.742
EFV94891.1
Sigma factor regulatory protein, FecR/PupR family; COG: COG3712.
 
 
 0.679
EFV94198.1
ABC transporter, ATP-binding protein; COG: COG1120.
 
    0.640
EFV94197.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.567
DhbF
AMP-binding enzyme; COG: COG1020.
   
  
 0.555
CirA_1
TonB-dependent receptor; COG: COG4771.
  
  
 0.532
BfrD_2
TonB-dependent receptor.
  
  
 0.522
DhbB
Phosphopantetheine attachment domain protein.
   
  
 0.469
HxuC_1
TonB-dependent receptor.
  
  
 0.452
Your Current Organism:
Lautropia mirabilis
NCBI taxonomy Id: 887898
Other names: L. mirabilis ATCC 51599, Lautropia mirabilis ATCC 51599, Lautropia mirabilis str. ATCC 51599, Lautropia mirabilis strain ATCC 51599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.