STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02898.1ABC transporter, ATP-binding protein; COG: COG1122. (473 aa)    
Predicted Functional Partners:
EFV01508.1
Hypothetical protein.
 
  0.900
EFV01962.1
Cobalt transport protein.
 
  0.860
EFV01318.1
Cobalt transport protein.
 
  0.857
EFV00495.1
Cobalt transport protein.
 
  0.855
EFV00502.1
Cobalt transport protein.
 
  0.837
EFV02124.1
Cobalt transport protein.
  
  0.834
EFV02877.1
Cobalt transport protein.
  0.827
EFV02695.1
Cobalt transport protein.
  
  0.789
EFV02897.1
Conserved hypothetical protein TIGR02185.
       0.773
EFV01319.1
Conserved hypothetical protein TIGR02185.
  
     0.759
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.