STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02875.1ABC transporter, ATP-binding protein; COG: COG1132. (569 aa)    
Predicted Functional Partners:
EFV02877.1
Cobalt transport protein.
 
  
  0.945
EFV02878.1
Conserved hypothetical protein TIGR02185.
 
    0.941
EFV01903.1
Peptidase, C39 family; COG: COG2274.
   
  0.916
EFV01347.1
ABC transporter, ATP-binding protein; COG: COG1126.
 
   
 
0.912
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.902
EFV02821.1
ABC transporter, ATP-binding protein; COG: COG1125.
 
     
0.884
EFV02872.1
Transcriptional regulator, TetR family.
 
     0.854
EFV01048.1
ABC transporter, ATP-binding protein; COG: COG1126.
 
   
 
0.844
EFV02876.1
ABC transporter, ATP-binding protein; COG: COG1122.
  
 
0.843
EFV02874.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
    
0.811
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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