STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02809.1Transcriptional regulator, LuxR family. (817 aa)    
Predicted Functional Partners:
EFV02810.1
Von Willebrand factor type A domain protein.
       0.658
EFV00789.1
AP2 domain protein.
  
     0.553
EFV00592.1
AP2 domain protein.
  
     0.545
EFV02355.1
Peptidase S24-like protein; COG: COG2932.
  
     0.531
EFV00987.1
Hsp20/alpha crystallin family protein; COG: COG0071; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.506
EFV02808.1
Hypothetical protein.
       0.490
EFV00800.1
Hypothetical protein.
  
     0.476
EFV02811.1
Pilin isopeptide linkage domain protein.
       0.452
EFV02620.1
Transcriptional regulator, LuxR family.
     
 0.440
EFV00572.1
Transcriptional regulator, LuxR family.
     
 0.440
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.