STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asrCSulfite reductase, subunit C; COG: COG2221; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (325 aa)    
Predicted Functional Partners:
asrA
Sulfite reductase, subunit A; COG: COG1145.
 
 0.994
asrB
Sulfite reductase, subunit B; COG: COG0543.
 
  
 0.990
nifJ-2
Pyruvate synthase; COG: COG0674.
  
 
 0.930
nifJ
Pyruvate synthase; COG: COG0674.
  
 
 0.923
EFV01092.1
4Fe-4S binding domain protein; COG: COG4624.
  
 
 0.836
EFV02652.1
4Fe-4S binding domain protein; COG: COG1142.
    
 0.828
cooS
Carbon-monoxide dehydrogenase, catalytic subunit; COG: COG1151.
  
  
 0.825
EFV00670.1
Dihydroorotate dehydrogenase, electron transfer subunit; COG: COG0543.
    
 0.824
EFV01996.1
Hydrogenase, Fe-only; COG: COG4624.
    
 0.823
EFV02887.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446.
   
  0.806
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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