STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02696.1ABC transporter, ATP-binding protein; COG: COG1122. (489 aa)    
Predicted Functional Partners:
EFV02695.1
Cobalt transport protein.
 
  0.968
EFV01508.1
Hypothetical protein.
 
  0.879
EFV02124.1
Cobalt transport protein.
  
  0.861
EFV02877.1
Cobalt transport protein.
  0.849
EFV01318.1
Cobalt transport protein.
 
  0.849
EFV00495.1
Cobalt transport protein.
 
  0.847
EFV01962.1
Cobalt transport protein.
 
  0.838
EFV00502.1
Cobalt transport protein.
 
  0.838
EFV02697.1
ABC transporter, ATP-binding protein; COG: COG1132.
    
0.828
EFV02693.1
Transcriptional regulator, TetR family.
 
     0.815
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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