STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypDHydrogenase expression/formation protein HypD; COG: COG0409. (349 aa)    
Predicted Functional Partners:
hypE
Hydrogenase expression/formation protein HypE; COG: COG0309.
 
 0.999
hypC
Hydrogenase assembly chaperone HypC/HupF.
 
 
 0.997
hypF
Carbamoyltransferase HypF; COG: COG0068.
 
  
 0.960
EFV02745.1
Putative iron-only hydrogenase system regulator.
  
  
 0.709
hydF
Hydrogenase maturation GTPase HydF; COG: COG1160.
     
 0.681
EFV02739.1
Oxidoreductase, nitrogenase component 1.
       0.649
EFV02747.1
Hypothetical protein.
       0.617
EFV02738.1
Putative nitrogenase iron protein; COG: COG1348; Belongs to the NifH/BchL/ChlL family.
       0.615
EFV02740.1
Hypothetical protein.
       0.614
EFV02746.1
Putative nitrogenase iron protein; COG: COG1348; Belongs to the NifH/BchL/ChlL family.
       0.591
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.