STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02471.1HAD hydrolase, family IA, variant 3; COG: COG0637. (218 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.786
EFV02224.1
HAD hydrolase, family IA, variant 3; COG: COG0637.
  
     0.775
mtlA
PTS system, mannitol-specific IIC component; COG: COG2213.
  
 
  0.775
EFV01459.1
HAD hydrolase, family IA, variant 3; COG: COG0637.
  
     0.773
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.765
cinA
Competence/damage-inducible domain protein CinA; COG: COG1058; Belongs to the CinA family.
    
  0.745
EFV02769.1
Inosine 5-monophosphate dehydrogenase; COG: COG0516.
    
  0.732
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; COG: COG0152; Belongs to the SAICAR synthetase family.
       0.533
EFV01969.1
PTS system, glucose-like IIB component; COG: COG1263.
     
 0.438
EFV02426.1
Alpha amylase, catalytic domain protein; COG: COG0366.
  
 
 0.426
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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