STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02489.1Hypothetical protein; COG: COG1937. (91 aa)    
Predicted Functional Partners:
EFV02488.1
Hypothetical protein.
       0.651
EFV02490.1
Putative DNA repair protein RadC; COG: COG2003; Belongs to the UPF0758 family.
       0.547
EFV02486.1
Hypothetical protein.
       0.543
EFV02487.1
ImpB/MucB/SamB family protein; COG: COG0389.
       0.543
EFV01998.1
Putative cadmium-exporting ATPase; COG: COG2217.
 
  
 0.535
EFV02422.1
Copper-exporting ATPase; COG: COG2217.
  
  
 0.534
EFV02879.1
Hypothetical protein.
    
   0.424
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.