STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02407.1Putative cyclase; COG: COG1878. (230 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; COG: COG0674.
    
  0.805
nifJ-2
Pyruvate synthase; COG: COG0674.
    
  0.799
EFV01996.1
Hydrogenase, Fe-only; COG: COG4624.
    
  0.772
pyc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.749
EFV02405.1
Hypothetical protein.
 
     0.727
EFV02404.1
Putative 2-hydroxy-3-oxopropionate reductase; COG: COG2084.
 
     0.689
EFV02406.1
Transporter, gluconate:H+ symporter family; COG: COG2610.
       0.665
EFV01304.1
3-dehydroquinate synthase; COG: COG0371.
  
     0.533
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.492
EFV02403.1
Methyltransferase domain protein.
       0.433
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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