STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02422.1Copper-exporting ATPase; COG: COG2217. (864 aa)    
Predicted Functional Partners:
EFV02421.1
Heavy metal-associated domain protein.
  
 
 0.923
EFV02420.1
Hypothetical protein; COG: COG1937.
 
  
 0.883
EFV02183.1
Heavy metal translocating P-type ATPase; COG: COG2217.
 
 
0.714
EFV01836.1
Heavy metal translocating P-type ATPase; COG: COG2217.
 
 
0.714
cadA
Cadmium-exporting ATPase; COG: COG2217.
 
 
0.707
EFV01998.1
Putative cadmium-exporting ATPase; COG: COG2217.
 
 
0.689
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.603
EFV02887.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446.
  
  
 0.557
EFV00420.1
Hypothetical protein; Belongs to the Dps family.
  
  
 0.545
nifJ
Pyruvate synthase; COG: COG0674.
  
  
 0.540
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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