STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02093.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
EFV01600.1
MATE efflux family protein; COG: COG0534.
      0.815
EFV00504.1
MATE efflux family protein; COG: COG0534.
      0.735
EFV02769.1
Inosine 5-monophosphate dehydrogenase; COG: COG0516.
  
 
  0.726
EFV02092.1
Glutaredoxin; COG: COG0695.
       0.651
EFV02094.1
Twitching motility protein; COG: COG2805.
       0.625
EFV02095.1
Hypothetical protein.
       0.625
EFV02089.1
DNA-binding regulatory protein, YebC/PmpR family; COG: COG0217.
       0.503
EFV02090.1
Hypothetical protein.
       0.503
EFV02091.1
Hypothetical protein; COG: COG4443.
       0.503
EFV01434.1
Hypothetical protein.
  
    0.502
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.