STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02104.1Efflux ABC transporter, permease protein. (745 aa)    
Predicted Functional Partners:
EFV02105.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.978
EFV01513.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.926
EFV01814.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.920
EFV00981.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.858
EFV00885.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.850
EFV02103.1
Thioesterase domain protein; COG: COG3208.
  
    0.777
EFV02102.1
SagB-type dehydrogenase domain protein.
       0.773
EFV02551.1
Hypothetical protein; COG: COG1136; 3.6.3.-.
  
 0.728
EFV02416.1
ABC transporter, ATP-binding protein; COG: COG1136.
  
 0.728
EFV02107.1
Phosphopantetheine attachment domain protein.
  
   0.708
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.