Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFV01493.1 | EFV01496.1 | HMP0721_1414 | HMP0721_1417 | Condensation domain protein. | Hypothetical protein. | 0.999 |
EFV01493.1 | EFV01498.1 | HMP0721_1414 | HMP0721_1419 | Condensation domain protein. | AMP-binding enzyme; COG: COG1020. | 0.991 |
EFV01493.1 | EFV01500.1 | HMP0721_1414 | HMP0721_1421 | Condensation domain protein. | Hypothetical protein; COG: COG1020. | 0.999 |
EFV01493.1 | EFV02107.1 | HMP0721_1414 | HMP0721_0873 | Condensation domain protein. | Phosphopantetheine attachment domain protein. | 0.999 |
EFV01493.1 | EFV02117.1 | HMP0721_1414 | HMP0721_0883 | Condensation domain protein. | DltD domain protein. | 0.974 |
EFV01493.1 | EFV02119.1 | HMP0721_1414 | HMP0721_0885 | Condensation domain protein. | MBOAT family protein; Could be involved in the transport of activated D-alanine through the membrane. | 0.988 |
EFV01493.1 | EFV02120.1 | HMP0721_1414 | HMP0721_0886 | Condensation domain protein. | Putative D-alanine--poly(phosphoribitol) ligase, subunit 1; COG: COG1020; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.975 |
EFV01493.1 | EFV02839.1 | HMP0721_1414 | HMP0721_0036 | Condensation domain protein. | AMP-binding enzyme; COG: COG1020. | 0.999 |
EFV01493.1 | EFV02840.1 | HMP0721_1414 | HMP0721_0037 | Condensation domain protein. | Methyltransferase domain protein; COG: COG1020. | 0.999 |
EFV01493.1 | dltC | HMP0721_1414 | HMP0721_0884 | Condensation domain protein. | D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.948 |
EFV01496.1 | EFV01493.1 | HMP0721_1417 | HMP0721_1414 | Hypothetical protein. | Condensation domain protein. | 0.999 |
EFV01496.1 | EFV01498.1 | HMP0721_1417 | HMP0721_1419 | Hypothetical protein. | AMP-binding enzyme; COG: COG1020. | 0.999 |
EFV01496.1 | EFV01500.1 | HMP0721_1417 | HMP0721_1421 | Hypothetical protein. | Hypothetical protein; COG: COG1020. | 0.999 |
EFV01496.1 | EFV02107.1 | HMP0721_1417 | HMP0721_0873 | Hypothetical protein. | Phosphopantetheine attachment domain protein. | 0.999 |
EFV01496.1 | EFV02117.1 | HMP0721_1417 | HMP0721_0883 | Hypothetical protein. | DltD domain protein. | 0.981 |
EFV01496.1 | EFV02119.1 | HMP0721_1417 | HMP0721_0885 | Hypothetical protein. | MBOAT family protein; Could be involved in the transport of activated D-alanine through the membrane. | 0.989 |
EFV01496.1 | EFV02120.1 | HMP0721_1417 | HMP0721_0886 | Hypothetical protein. | Putative D-alanine--poly(phosphoribitol) ligase, subunit 1; COG: COG1020; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.996 |
EFV01496.1 | EFV02839.1 | HMP0721_1417 | HMP0721_0036 | Hypothetical protein. | AMP-binding enzyme; COG: COG1020. | 0.999 |
EFV01496.1 | EFV02840.1 | HMP0721_1417 | HMP0721_0037 | Hypothetical protein. | Methyltransferase domain protein; COG: COG1020. | 0.999 |
EFV01496.1 | dltC | HMP0721_1417 | HMP0721_0884 | Hypothetical protein. | D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.988 |
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