STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02125.1Conserved hypothetical protein TIGR02185. (201 aa)    
Predicted Functional Partners:
EFV02124.1
Cobalt transport protein.
 
     0.945
EFV02126.1
Transcriptional regulator, TetR family.
 
     0.945
EFV02123.1
ABC transporter, ATP-binding protein; COG: COG1122.
 
     0.937
EFV02695.1
Cobalt transport protein.
  
     0.752
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.748
EFV00681.1
Conserved hypothetical protein TIGR03982.
     
 0.737
EFV02696.1
ABC transporter, ATP-binding protein; COG: COG1122.
  
     0.696
EFV02426.1
Alpha amylase, catalytic domain protein; COG: COG0366.
     
 0.666
EFV02693.1
Transcriptional regulator, TetR family.
  
     0.662
EFV01387.1
Hypothetical protein.
  
     0.611
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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