STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV02126.1Transcriptional regulator, TetR family. (210 aa)    
Predicted Functional Partners:
EFV02125.1
Conserved hypothetical protein TIGR02185.
 
     0.945
EFV02124.1
Cobalt transport protein.
 
     0.935
EFV02123.1
ABC transporter, ATP-binding protein; COG: COG1122.
 
     0.904
EFV01387.1
Hypothetical protein.
  
     0.752
EFV00788.1
Conserved repeat protein.
  
     0.723
EFV02879.1
Hypothetical protein.
  
   
 0.677
EFV00492.1
Transcriptional regulator, AraC family.
  
     0.490
EFV01968.1
Hypothetical protein.
  
     0.476
EFV01560.1
Hypothetical protein.
  
     0.464
EFV01393.1
Hypothetical protein.
  
     0.457
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.