STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01721.1HAD hydrolase, family IA, variant 1; COG: COG0546. (229 aa)    
Predicted Functional Partners:
EFV02225.1
Putative phosphoglycolate phosphatase, bacterial; COG: COG0546.
  
  
  0.882
EFV01700.1
Putative phosphoglycolate phosphatase, bacterial; COG: COG0546.
  
  
 
0.800
EFV01969.1
PTS system, glucose-like IIB component; COG: COG1263.
  
 
  0.800
EFV01367.1
Putative glycolate oxidase, subunit GlcD; COG: COG0277.
    
 0.790
EFV02769.1
Inosine 5-monophosphate dehydrogenase; COG: COG0516.
    
  0.789
pdxB-5
4-phosphoerythronate dehydrogenase; COG: COG1052; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.781
cinA
Competence/damage-inducible domain protein CinA; COG: COG1058; Belongs to the CinA family.
    
  0.777
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.774
EFV01720.1
tRNA nucleotidyltransferase/poly(A) polymerase family protein; COG: COG0617; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.774
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.773
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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