STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01856.1Glycosyl hydrolase family 25. (302 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.851
cinA
Competence/damage-inducible domain protein CinA; COG: COG1058; Belongs to the CinA family.
   
 
 0.814
EFV02769.1
Inosine 5-monophosphate dehydrogenase; COG: COG0516.
    
  0.795
EFV02088.1
Hypothetical protein.
    
 0.795
EFV00788.1
Conserved repeat protein.
    
 0.795
EFV01857.1
Holin, phage phi LC3 family.
       0.774
EFV01858.1
Hypothetical protein.
       0.762
EFV02270.1
Glycosyl hydrolase family 25.
   
 0.755
EFV01859.1
Hypothetical protein.
  
    0.747
EFV01864.1
Phage tail tape measure protein, TP901 family.
 
     0.710
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.