STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01862.1Hypothetical protein. (347 aa)    
Predicted Functional Partners:
EFV01861.1
Hypothetical protein.
       0.783
EFV01863.1
Ricin-type beta-trefoil lectin domain protein.
       0.773
EFV01864.1
Phage tail tape measure protein, TP901 family.
       0.773
EFV01860.1
Hypothetical protein.
       0.752
EFV01859.1
Hypothetical protein.
       0.525
EFV01858.1
Hypothetical protein.
       0.503
EFV01856.1
Glycosyl hydrolase family 25.
       0.496
EFV01857.1
Holin, phage phi LC3 family.
       0.496
EFV01865.1
Hypothetical protein.
       0.457
EFV01866.1
Phage major tail protein, phi13 family.
       0.451
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.