STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiKCobalt chelatase (CbiK); COG: COG4822. (263 aa)    
Predicted Functional Partners:
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.999
cobK
precorrin-6A reductase; COG: COG2099.
 
 
 0.999
cobJ
precorrin-3B C(17)-methyltransferase; COG: COG1010.
 
 
 0.999
EFV01215.1
CbiG; COG: COG2073.
 
 
 0.999
cobM
Precorrin-4 C(11)-methyltransferase; COG: COG2875.
 
 0.999
cobH
precorrin-8X methylmutase; COG: COG2082.
 
 
 0.998
cobI
Precorrin-2 C(20)-methyltransferase; COG: COG2243; Belongs to the precorrin methyltransferase family.
 
 0.996
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.995
EFV01222.1
Siroheme synthase domain protein.
    
 0.984
cobA
uroporphyrinogen-III C-methyltransferase; COG: COG0007.
 
 
 0.981
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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